BYKdb

Dataset for cluster cd of phylum proteobacteria

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
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mnmmdsrkfrrksrplttmvvspqeqatqqmpsvvpvinpylyrtikpvrstrlakrsfestqgqtrpdpdyawqgrkre
        eli rka lgktpddlklnsldtlplpalfgak   sfeet egq vrplrglse        a rgaeai 
                  ell  e d ak  adff               dee   ia  egd                 
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
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vprlaapvartvgevyskaqmraqrslyqqahnwlntrtsrrrveqntvkqqvqayrqaqktvhsesrastltminnlqn
afqievlehnqkekltlisgkpgkmritenesdlalgglqqqiiqldrseikle q erpgqdfivgkqrlvstaleqms
 ak   aa llga aeie  ad  fgaed    e eaeainlae gaga aeaa l a eeladamaifgaqrreevyar
                                                                   e e  gq   m e
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
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nltvtetgkdtgvlsltftgedrqqirrilnsitrnylqqdiarkseearrslaflakqlpevrsrldvaedklnefrrd
sqsiadaqrqs iiy slrdqnpdsrnevideysnqnvemnmvereafsgkrvqevkrvvrltpiqvqesrnarlaaeqe
rflevarnekn   t  ie  elkrleqaes vqhlaerltvsmsrkyraqvrepsrdrpikperkrsapstrympyqps
qek   q   a           e kaak  a agd   a lrkkqamtqq qarlqnsgkedivkepprllrvigtvhar
a a                   a h  d            kle p iqmh n ndieleiaae gdillg q edqratq
                        a               ag  h  nl  k g  daaa  a aaeeke e dakk  k
                                            a   d  g                d          i
                                                                               a
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----------------------------------------------------------------msriekalekaarlr
kdsvdlpleakavldsmvnidaqlneltfkeaeisklftkahpayrtllekrkaledekaklngrvtampetqqeiremt
rraav si t siqsqveelatvktnanlrrvgleqayareektlqrqmstvstaqasnvewqaqegk----marllkrq
epktl      gairakasv sm s  kkqisae r r gi aeansitrqqnr  rqltdpare-e-vfql----v---
aeeqa           i  q ra a  ea  q     i       ka a emaq  qpisgirqkydvqaakvgqy-qkk
                a    n         k                        kdeqahpkdqasltrigttvsniv
                                                        hadl alh i-n lm epgtngvs
                                                               e arg ks dl skaep
                                                               d  qe  d  k mgmdg
                                                                  k      i  edae
                                                                               d
                                                                               a
                                                                                
                                                                                
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
rd-----------l-rqqetarppetavgavrvpdpaqpp----------------------------------------
a-veegqqpymql-n-eeaplieaastaadepia--pptqvprplkpkkaliilgsivlglmlsivgvllrsllnrgiet
eggmspppvevpvpepaavlkvte-a--d---d-lv--ea ekvvervrrpvvavgtiastavavslsfvqerfpepare
sanaaarardraafrkgk-s-paqt-vq-sgs-veryl-- igeataepkmslvraflilqpfqrarqksldpeystttl
qelrvrerevktqdss-gsevlqsqppppvahptaalisd nqksl qltgdpgmtlagefleemtpaanftavtqslqa
nydgtmvlatareafgs-q-rtlkngriensgeitsvvan aparf nhiaaa lpa   aia l m  daqk sdaep 
gtstrvtttrtstvdtydragq-gkvlrrgrmasqnkrqg    p  mae    i      g    i    if ra  k 
dsrsqtssqqslssqlvtpveav-srsettplrepqhyme    d    d                     a  a     
-rmqpsaenpq mrghrsnqw-hrrfnslpniqyglftlt                                        
tpkpln  lln fqaekrinqsdmpekkcl elqvees s                                        
mnenki  igg  g adpdmpm lldgh e dghs dm                                          
 kad h  ffe  e   l kng hd eg    fg   k                                          
 h   e   a         im  d  d      f   g                                          
     d              d                d                                          
                                     a                                          

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----------------eee-----yaspplse--------------------------------------------lvt
spqvaeqadqeaavahdls-tgisvvgrl----ptpvlknsargtttadpwqklrdsvktpkgikrykqkaekeysf--s
papa             -rqavspqldpirrqnrpelt            qpaaqsvtvdirrlrvhrd      pryli
qtet             qapsavrmi-nvaslden aa            nsv  rlslsesqhqmvtv      eqvaa
kndq             r-lh qndaegaqhaa a               lhr  nipsqvnhdhdsll      klm -
aere             pval pgc-p-svvrr                 fel  ef rnlfs ean i      tki v
                 dpsk maaqslrntpk                  de     nladp d f e      rtf n
                 aivv d  pqaempds                          k    a a a      dsa l
                 twtp a   nm- avq                          h               ay  f
                 mlri     kkq  tp                                           n   
                 igkd      d    h                                           m   
                 g i                                                        a   
                 c d                                                            
                                                                                
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                :  ::.     **:    *:*  ::      .:.:* *:*       :
lndphspaaeeyrklktslv--ltmmeafnnvl-mvtsaspgeGKsftaaNLAislaqefdhtvLliDaDlRrpslhryl
vanradlvi-afdvfrsailkafalgdrqwktilaisgstksc  tlvsl i avisrtyn-rtvvv c m kgytaklf
ige----ehasi-s--er-hrrmrkrqngrtrv l pisni   ilcv   vi  gqlkqk mim t i s tisevi
--avtts-svqlqtv -ia-q qpdpggpqri    vvhda   vivs   -a  kshsey  fl m f a avitr 
tt-mqrym-t--n-  qt qa i-tvavrppc      tlgrv   y  i   tt  amg-cn     l   l mc qt 
asslrerlvdtv n  nm m  -sssshtkha      ghak    t         l-rvh     g   g g  ds 
slg e qit    l  a- c  k nlrtdl m       rvh    m         gigt      f        sh 
rkt l gf     i   n    h -khqad l       gt               ae n               h  
mhk i        g   l    g ra p   k       f                   v l                  
hef g            k    a q- i           a                   s k                  
g                       et e                               q                    
                                                           a                    
                                                                                
                                                                                
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        :   :                       .             : :        .           ::.* .*
gve-pgpglsdclrggvdvgeal------vptgigklsllpagsavpnpsEllssprmrellaelksry-dryiiiDtpP
ninnvev-maeivldklplestiirmgenkkhaganfdfisrtqvpeyaadvfmhqqfkrtitwishqlp-dvvlf ss 
etaprdg vgnymaeegeiadcalqptt indsvrriaigrn-kpeadvv riqdeatgafvdrarlnfap lmvv la 
tysvqnr itgvitrtarptqlvhclep hqvvtngvvvmlshriik sg m ttdslasvmqdmete r  il m  
rlpsnks    l sariqfskhma e d tisrrht t--f-dtttt  m i aqnkgsdsfeqvyrl t  m    g  
dfqgkha    t vvqtacdtv       rrplqsh gyv-y -sas  l   lntnsqtm rl qqk n  h    a  
cqdddvy    m ykvss pri       plnilqa  m tm v-fr  h   hasm nva nh nn  g          
 mr stq    f m nrh kpg       lgie p      h fr g        re vk  l   p  e          
 kk hln      k lkg   f       ef d e      g eq          l      k   k             
 dg gil      i dh            d    d      c ck          k      i   i             
    fck      d  e                 c                    i      h   g             
    ea                                                 g          e             
    a                                                  a          d             
                                                                  a             
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     :   .    .  . *          :             : * : .                             
vlpfaearslarlvdgvllVvregvttlkeveealerlkgnk--vlGvvyNaa-d---atg-----yyyygyy-------
iyavtdtlaispqagttvf akyalasqadirdsisafgqsgiplk iiltsvserrr-s-yydyg--r----ssykgyg
aqlyd vaivgnhf siim iggrknreenlkttvrlydk-dvqiy m fsrtr-vdks-siqrgass-syhqyasaaqa
lmyts snvfrhvi iamy  msqqvpvrt qalkdsredenttmr t t ki vivsgddhrk tgneksskadeykvs
p sg  git qti  acfi  efnmskrdq svgfth -rvpsl g l m es fytipnevas snkghefgrgpwdpp
t i    yn  qy         aeip msp dr-ynt qnttah a a k qf tmkgnvksvq rhhkdhdhkyknq  
  f    tl  ds         wdg  ith t vwak naks d   c   n  skgafcqrlg prddar nqtggh  
       mg  sm         h a  aq  n iqki l-cr a       g  agsqtrnnha mkas q dpqcte  
           gf           t  kn  l ceg  ftaq         f  rnqnrlaee   d h n annar   
           f            r              sqe         d  klnhlg dd   a   a  eelp   
                        h              e              ifhdke a           d  h   
                                                      hae d                 d   
                                                      g a                       
                                                                                
                                                                                

       730       740        
....:....|....:....|....:...
                            
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padnagmmrstpektgklsrrlgkrgsk
yssyraeaahraaga gkgdi       
thqsp                       
rggq                        
a eg                        
  ae                        
                            
                            
                            
                            
                            
                            
                            
                            
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